López Siles, M.; Martínez-Medina, M.; Aldeguer, X.; Lopez-Oliu, C; Garcia-Gil, L.J. "Real-time PCR quantification of mucosa-associated Escherichia coli and Faecalibacterium prausnitzii to support Crohn's Disease diagnostics." Gut (2009): -. Mas-de-Xaxars, T.; López Siles, M.; Martínez-Medina, M.; Aldeguer, X.; Garcia-Gil, L.J. "A first experimental approach to the effect of Adalimumab treatment on the microbial composition of the intestinal mucosa in Crohn's disease patients." Journal of Crohn's and Colitis 3 (2009): S137-S137. López Siles, M.; Martínez-Medina, M.; Aldeguer, X.; Garcia-Gil, L.J. "Mucosa-associated Escherichia coli and Faecalibacterium prausnitzii quantification by real-time PCR and its potential use as complementary diagnostic tool for inflammatory bowel diseases." Journal of Crohn's and Colitis 3 (2009): S135-S135. Martínez-Medina, M.; López Siles, M.; Aldeguer, X.; Gonzalez-Huix, F.; López-Oliu, C.; Dahbi, G.; Blanco, J.E.; Blanco, J.; Darfeuille-Michaud, A.; Garcia-Gil, L.J. "P301 Molecular diversity of Escherichia Coli in human's gut: new evidences supporting the role of aiec in crohn's disease." Journal of Crohn's and Colitis 2 (2008): 93-93. Martinez-Medina, M.; Aldeguer, X.; Gonzalez-Huix, F.; Acero, D.; López Siles, M.; Garcia-Gil, L.J. "P197 Is Escherichia Coli more than a commensal bacterium in the intestinal mucosa of crohn's disease patients?." Journal of Crohn's and Colitis 1 (2007): 54-54.
Díaz-Rizzolo DA; Kostov B; López-Siles M; Serra A; Colungo C; González-de-Paz L; Martinez-Medina M; Sisó-Almirall A; Gomis R. "Healthy dietary pattern and their corresponding gut microbiota profile are linked to a lower risk of type 2 diabetes, independent of the presence of obesity." Clinical Nutrition 39 (2020): 524-532. Carla Camprubí-Font, Belén Ruiz del Castillo, Silvia Barrabés, Luis Martínez-Martínez and Margarita Martinez-Medina "Amino acid substitutions and differential gene expression of outer membrane proteins in adherent-invasive Escherichia coli." Frontiers in Microbiology 10 (2019): 1-10. Fassatoui M; Lopez-Siles M; Díaz-Rizzolo DA; Jmel H; Naouali C; Abdessalem G; Chikhaoui A; Nadal B; Jamoussi H; Abid A; Gomis R; Abdelhak S; Martinez-Medina M; Kefi R. "Gut microbiota imbalances in Tunisian participants with type 1 and type 2 diabetes mellitus." Bioscience Reports 39 (2019): BSR20182348.-. Carla Camprubí-Font, Christa Ewers, Mireia Lopez-Siles and Margarita Martinez-Medina "Genetic and Phenotypic Features to Screen for Putative Adherent-Invasive Escherichia coli." Frontiers in Microbiology 10 (2019): 1-11. Lopez-Siles M; Enrich-Capó N; Aldeguer X; Sabat-Mir M; Duncan SH; Garcia-Gil LJ; Martinez-Medina M. "Alterations in the Abundance and Co-occurrence of Akkermansia muciniphila and Faecalibacterium prausnitzii in the Colonic Mucosa of Inflammatory Bowel Disease Subjects." Frontiers In Cellular And Infection Microbiology 8 (2018): 281-. Carla Camprubí-Font, Mireia Lopez-Siles, Meritxell Ferrer-Guixeras, Laura Niubó-Carulla, Carles Abellà-Ametller, Librado Jesús Garcia-Gil & Margarita Martinez-Medina "Comparative genomics reveals new single-nucleotide polymorphisms that can assist in identification of adherent-invasive Escherichia coli." Scientific Reports 8 (2018): -. Lopez-Siles, M; Martinez-Medina, M; Surís-Valls, R; Aldeguer, X; Sabat-Mir, M; Duncan, S.H; Flint, H.J; Garcia-Gil, L.J "Changes in the Abundance of Faecalibacterium prausnitzii Phylogroups I and II in the Intestinal Mucosa of Inflammatory Bowel Disease and Patients with Colorectal Cancer." Inflammatory Bowel Diseases 22 (2016): 28-41. Lopez-Siles, M; Martinez-Medina, M; Surís-Valls, R; Aldeguer, X; Sabat-Mir, M; Duncan, S.H; Flint, H.J; Garcia-Gil, L.J "Changes in the Abundance of Faecalibacterium prausnitzii Phylogroups I and II in the Intestinal Mucosa of Inflammatory Bowel Disease and Patients with Colorectal Cancer." Inflammatory Bowel Diseases 22 (2016): 28-41. Mariona Balfegó; Silvia Canivell; Felicia A. Hanzu; Aleix Sala-Vila; Margarita Martínez-Medina; Serafín Murillo; Teresa Mur; Elena G. Ruano; Francisca Linares; Nuria Porras; Silvia Valladares; Maria Fontalba; Elena Roura; Ann "Effects of sardine-enriched diet on metabolic control, inflammation and gut microbiota in drug-naïve patients with type 2 diabetes: a pilot randomized trial." Lipids in Health and Disease (2016): -. Agus A, Denizot J, Thévenot J, Martinez-Medina M, Massier S, Sauvanet P, Bernalier-Donadille A, Denis S, Hofman P, Bonnet R, Billard E, Barnich N "Western diet induces a shift in microbiota composition enhancing susceptibility to Adherent-Invasive E. coli infection and intestinal inflammation.." Scientific Reports 63 (2016): -. Lopez-Siles, M.; Martinez-Medina, M.; Abellà, C.; Busquets, D.; Sabat-Mir, M.; Duncan, S.H.; Aldeguer, X.; Flint, H.J.; Garcia-Gil, L.J. "Mucosa-associated Faecalibacterium prausnitzii phylotype richness is reduced in patients with inflammatory bowel disease." Applied and Environmental Microbiology 81 (2015): 7582-7592. Busquets, D.; Mas-de-Xaxars, T.; López-Siles, M.; Martínez-Medina, M.; Bahí, A.; Sàbat, M.; Louvriex, R.; Miquel-Cusachs, J.O.; Garcia-Gil, J.L.; Aldeguer, X. "Anti-tumour Necrosis Factor Treatment with Adalimumab Induces Changes in the Microbiota of Crohn's Disease." Journal of Crohn's and Colitis 9 (2015): 899-906. López Siles, M.; Martinez-Medina, M.; Busquets, D.; Sabat-Mir,M; Duncan, S.H.; Flint, H.J.; Aldeguer, X.; Garcia-Gil, L.J. "Mucosa-associated Faecalibacterium prausnitzii and Escherichia coli co-abundance can distinguish Irritable Bowel Syndrome and Inflammatory Bowel Disease phenotypes." International Journal of Medical Microbiology 304 (2014): 464-475. Martinez-Medina M; Denizot J; Dreux N; Robin F; Billard E; Bonnet R; Darfeuille-Michaud A; Barnich N. "Western diet induces dysbiosis with increased E coli in CEABAC10 mice, alters host barrier function favouring AIEC colonisation." Gut 63 (2013): 116-124. Dreux N, Denizot J, Martinez-Medina M, Mellmann A, Billig M, Kisiela D, Chattopadhyay S, Sokurenko E, Neut C, Gower-Rousseau C, Colombel J.F, Bonnet R, Darfeuille-Michaud A, Barnich N "Point Mutations in FimH Adhesin of Crohn's Disease-Associated Adherent-Invasive Escherichia coli Enhance Intestinal Inflammatory Response." PLoS Pathogens 9 (2013): -. Martinez Medina, M.; Garcia-Gil, L.J.; Barnich, N.; Wieler, L.H; Ewers, Ch. "Adherent-Invasive Escherichia coli Phenotype Displayed by Intestinal Pathogenic E. coli Strains from Cats, Dogs, and Swine." Applied and Environmental Microbiology 77 (2011): 5813-5817. Martínez-Medina, M.; Mora, A.; Blanco, M.; López, C.; Alonso, M.P.; Bonacorsi, S.; Nicolas-Chanoine, M.H.; Darfeuille-Michaud, A.; Garcia-Gil, L.J.; Blanco, J. "Similarity and divergence among adherent-invasive E. coli (AIEC) and extraintestinal pathogenic E. coli (ExPEC)." Journal of Clinical Microbiology 47 (2009): 3968-3979. Martinez-Medina, M.; Aldeguer, X.; López Siles, M.; Gonzalez-Huix, F.; López-Oliu, C.; Dahbi, G.; Blanco, J.E.; Blanco, J.; Garcia-Gil, L.J.; Darfeuille-Michaud, A. "Molecular diversity of Escherichia coli in the human gut: new ecological evidence supporting the role of adherent-invasive E. coli (AIEC) in Crohn's disease." Inflammatory Bowel Diseases 15 (2009): 872-882. Martínez-Medina, M.; Naves, P.; Blanco, J.; Aldeguer, X.; Blanco, J.; Blanco, M.; Ponte, C.; Soriano, F.; Darfeuille-Michaud, A.; Garcia-Gil, L.J. "Biofilm formation as a novel phenotypic feature of adherent-invasive Escherichia coli (AIEC)." BMC Microbiology 9 (2009): 202-220. Martinez-Medina, M.; Aldeguer, X.; González-Huix, F.; Doroteo Acero, M.D.; Garcia-Gil, L.J. "Abnormal microbiota composition in the ileocolonic mucosa of Crohn's disease patients as revealed by polymerase chain reaction-denaturing gradient gel electrophoresis ." Inflammatory Bowel Diseases 12 (2006): 1136-1145.
Bañeras, L.; Gich, F.; Martinez-Medina, M.; Miller, M.; Abella, C.A.; Borrego, C. M. "New phylotypes of mesophilic filamentous anoxygenic phototrophic bacteria enriched from sulfide-containing environments." Environmental Microbiology Reports 1 (2009): 86-93.
Lopez-Siles, M; Duncan, S.H; Garcia-Gil, L.J; Martinez-Medina, M "Faecalibacterium prausnitzii: from microbiology to diagnostics and prognostics." ISME Journal (2017): 841-852. J. Vila, E. Saez-Lopez, J. R. Johnson, U. Romling, U. Dobrindt, R. Canton, C. G. Giske, T. Naas, A. Carattoli, M. Martınez-Medina, J. Bosch, P. Retamar, J. Rodrıguez-Bano, F. Baquero and S. M. Soto "Escherichia coli: an old friend with new tidings." Fems Microbiology Reviews (2016): -. Massart S, Martinez-Medina M, Jijakli H "Biological control in the microbiome era: Challenges and opportunities." Biological Control 89 (2015): 98-108. Martinez-Medina M, Garcia-Gil LJ. "Escherichia coli in chronic inflammatory bowel diseases: An update on adherent invasive Escherichia coli pathogenicity.." World Journal of Gastrointestinal Pathophysiology 15 (2014): 213-227.